Genome-wide transcriptome profiling
WebMar 8, 2024 · Transcriptome Profiling and Genome-Wide Association Studies Reveal GSTs and Other Defense Genes Involved in Multiple Signaling Pathways Induced by … WebWe generated spatiotemporal mRNA and small RNA transcriptome data, spanning seven tissues at three time points, to investigate the effects of heat stress on vegetative and …
Genome-wide transcriptome profiling
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WebApr 12, 2024 · To quantitatively assess the differences in single transcriptome profiling obtained with either technique, we compared: a) the number of reads/cell; b) genes/cells, and: c) the relationship of read depth/cell and mapped genes, across the two techniques (single-cell and single-nucleus RNA sequencing) in all three organs (heart, kidney, and …
WebJul 1, 2024 · Genome-wide transcriptome analysis and physiological variation modulates gene regulatory networks acclimating salinity tolerance in chickpea Neeraj Kumar, K.R., Bharadwaj, Sneha Priya P.R., Abhishek K. Shrivastava, Pal, Roorkiwal, Kuldeep Kumar, B.S. Patil, Anjali Soni, Nimmy M.S., Kadambot H.M. Siddique f , Rajeev … WebApr 11, 2024 · Genome-wide identification and expression profiling of snakin/GASA ... The expression pattern of HvGASA genes in various tissues was obtained from publically …
WebThe MYB transcription factors participates in various physiological activities of plants, such as phytohormone signal transduction and disease resistance. In this study, 54 MiMYB transcription factors were identified in the mango genome (371.6 Mb). WebThe current study explained the detailed genome-wide analysis of cyclin-like genes in P. xylostella, which provided a basis for subsequent research to assess the roles of cyclin genes in reproduction, and the cyclin gene may be considered an effective target site to control this pest. ... Transcriptome-based expression profiling of cyclin genes ...
WebAug 1, 2004 · Chapter 4 contains a summary of gene sequencing algorithms, and chapter 5 introduces transcription, the first step of gene expression, and techniques for gene expression profiling. Finally, chapters 6 and 7 introduce the proteome, which refers to the sum of proteins produced from a genome, and tools for predicting protein structure and …
WebRice black-streaked dwarf virus (RBSDV) causes maize rough dwarf disease (MRDD), which is a viral disease that significantly affects maize yields worldwide. Plants tolerate stress through transcriptional reprogramming at the alternative splicing (AS), transcriptional, and fusion gene (FG) levels. However, it is unclear whether and how AS and FG … car butler houston txWebMar 16, 2024 · However, the genome-wide genotyping accuracy is still not comparable to the whole genome sequencing (WGS). Second, both the short fragment sizes in NGS libraries and the lack of spatial proximity information in long-read sequencing prevent the characterization of spatial interactions between genetic variants and distal CRE activities … brody communicationsWebFeb 20, 2014 · A genome-wide homologous recombination screen identifies the RNA-binding protein RBMX as a component of the DNA-damage response. Nat. Cell Biol. 14 , 318–328 (2012). brody company vasesWebHerein, we report the findings of the first genome-wide analyses of mRNA/lncRNA transcriptome profiling and co-expression networks in PDAC cell line-derived CD133+/CD44+ cells, which were shown to bear a CSC-like phenotype in vitro and in vivo. Compared to CD133−/CD44− cells, the CD133+/CD44+ population demonstrated … car butterflyWebMay 7, 2016 · Genome-Wide Transcriptome Profiling of Mycobacterium smegmatis MC² 155 Cultivated in Minimal Media Supplemented with Cholesterol, Androstenedione or … car butter wet waxWebDec 22, 2024 · Global transcriptional profiling is a powerful tool that can expose expression patterns to define cellular states or to identify genes with similar expression patterns. In recent years, transcriptome profiling has been widely used to understand the genetic regulation of a particular cell type. brody caster bandWebDec 3, 2024 · In recent years, transcriptome mapping has become a particularly effective method for genome annotation and discovery and the annotation of novel functional genes, especially in non-model plants, which lack a reference genome (Wang et al., 2009; Song et al., 2024).Sequencing technologies have dramatically accelerated genome-wide … brody cone cedar rapids iowa